Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Vbra_11023 | Vbra_15823 | A0A0G4E9K8 | A0A0G4FP48 | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | Phos_pyr_kin domain-containing protein. | 0.582 |
| Vbra_11023 | Vbra_19109 | A0A0G4E9K8 | A0A0G4GYE5 | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | TENA_THI-4 domain-containing protein. | 0.582 |
| Vbra_11023 | Vbra_20857 | A0A0G4E9K8 | A0A0G4EU50 | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | Thiamine thiazole synthase; Involved in biosynthesis of the thiamine precursor thiazole. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5- (2-hydroxyethyl)-4-methylthiazole-2-carboxylic acid (ADT), an adenylated thiazole intermediate. The reaction includes an iron- dependent sulfide transfer from a conserved cysteine residue of the protein to a thiazole intermediate. The enzyme can only undergo a single turnover, which suggests it is a suicide enzyme. May have additional roles in adaptation to various stress conditions and in DNA damage tolerance; Belongs to the T [...] | 0.583 |
| Vbra_13224 | Vbra_15823 | A0A0G4ETQ6 | A0A0G4FP48 | BTB domain-containing protein. | Phos_pyr_kin domain-containing protein. | 0.582 |
| Vbra_13224 | Vbra_19109 | A0A0G4ETQ6 | A0A0G4GYE5 | BTB domain-containing protein. | TENA_THI-4 domain-containing protein. | 0.582 |
| Vbra_13224 | Vbra_20857 | A0A0G4ETQ6 | A0A0G4EU50 | BTB domain-containing protein. | Thiamine thiazole synthase; Involved in biosynthesis of the thiamine precursor thiazole. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5- (2-hydroxyethyl)-4-methylthiazole-2-carboxylic acid (ADT), an adenylated thiazole intermediate. The reaction includes an iron- dependent sulfide transfer from a conserved cysteine residue of the protein to a thiazole intermediate. The enzyme can only undergo a single turnover, which suggests it is a suicide enzyme. May have additional roles in adaptation to various stress conditions and in DNA damage tolerance; Belongs to the T [...] | 0.583 |
| Vbra_13251 | Vbra_15823 | A0A0G4ETM2 | A0A0G4FP48 | PfkB domain-containing protein. | Phos_pyr_kin domain-containing protein. | 0.582 |
| Vbra_13251 | Vbra_19109 | A0A0G4ETM2 | A0A0G4GYE5 | PfkB domain-containing protein. | TENA_THI-4 domain-containing protein. | 0.582 |
| Vbra_13251 | Vbra_20857 | A0A0G4ETM2 | A0A0G4EU50 | PfkB domain-containing protein. | Thiamine thiazole synthase; Involved in biosynthesis of the thiamine precursor thiazole. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5- (2-hydroxyethyl)-4-methylthiazole-2-carboxylic acid (ADT), an adenylated thiazole intermediate. The reaction includes an iron- dependent sulfide transfer from a conserved cysteine residue of the protein to a thiazole intermediate. The enzyme can only undergo a single turnover, which suggests it is a suicide enzyme. May have additional roles in adaptation to various stress conditions and in DNA damage tolerance; Belongs to the T [...] | 0.583 |
| Vbra_15823 | Vbra_11023 | A0A0G4FP48 | A0A0G4E9K8 | Phos_pyr_kin domain-containing protein. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.582 |
| Vbra_15823 | Vbra_13224 | A0A0G4FP48 | A0A0G4ETQ6 | Phos_pyr_kin domain-containing protein. | BTB domain-containing protein. | 0.582 |
| Vbra_15823 | Vbra_13251 | A0A0G4FP48 | A0A0G4ETM2 | Phos_pyr_kin domain-containing protein. | PfkB domain-containing protein. | 0.582 |
| Vbra_15823 | Vbra_16046 | A0A0G4FP48 | A0A0G4FT31 | Phos_pyr_kin domain-containing protein. | Uncharacterized protein. | 0.797 |
| Vbra_15823 | Vbra_1710 | A0A0G4FP48 | A0A0G4EUY6 | Phos_pyr_kin domain-containing protein. | PfkB domain-containing protein. | 0.582 |
| Vbra_15823 | Vbra_19109 | A0A0G4FP48 | A0A0G4GYE5 | Phos_pyr_kin domain-containing protein. | TENA_THI-4 domain-containing protein. | 0.474 |
| Vbra_15823 | Vbra_20857 | A0A0G4FP48 | A0A0G4EU50 | Phos_pyr_kin domain-containing protein. | Thiamine thiazole synthase; Involved in biosynthesis of the thiamine precursor thiazole. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5- (2-hydroxyethyl)-4-methylthiazole-2-carboxylic acid (ADT), an adenylated thiazole intermediate. The reaction includes an iron- dependent sulfide transfer from a conserved cysteine residue of the protein to a thiazole intermediate. The enzyme can only undergo a single turnover, which suggests it is a suicide enzyme. May have additional roles in adaptation to various stress conditions and in DNA damage tolerance; Belongs to the T [...] | 0.729 |
| Vbra_15823 | Vbra_21726 | A0A0G4FP48 | A0A0G4FVD3 | Phos_pyr_kin domain-containing protein. | Uncharacterized protein. | 0.582 |
| Vbra_15823 | Vbra_22771 | A0A0G4FP48 | A0A0G4GJY5 | Phos_pyr_kin domain-containing protein. | PfkB domain-containing protein. | 0.582 |
| Vbra_16046 | Vbra_15823 | A0A0G4FT31 | A0A0G4FP48 | Uncharacterized protein. | Phos_pyr_kin domain-containing protein. | 0.797 |
| Vbra_16046 | Vbra_19109 | A0A0G4FT31 | A0A0G4GYE5 | Uncharacterized protein. | TENA_THI-4 domain-containing protein. | 0.797 |
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