STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vbra_14112Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (542 aa)    
Predicted Functional Partners:
Vbra_4722
Uncharacterized protein.
   
 0.674
Vbra_8486
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.
   
 
 0.654
Vbra_2880
Amidohydro-rel domain-containing protein.
  
 
 0.645
Vbra_13042
Beta_elim_lyase domain-containing protein.
  
 
 0.645
Vbra_17264
Uncharacterized protein.
     
 0.601
Vbra_15951
OHCU_decarbox domain-containing protein.
  
 
 0.576
Vbra_875
5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
  
 
 0.576
Vbra_7454
Uncharacterized protein.
   
 0.562
Vbra_13390
Aminotran_5 domain-containing protein.
   
 
  0.549
Vbra_16742
Pex2_Pex12 domain-containing protein.
     
 0.533
Your Current Organism:
Vitrella brassicaformis
NCBI taxonomy Id: 1169540
Other names: V. brassicaformis CCMP3155, Vitrella brassicaformis CCMP3155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.