STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vbra_14299Uncharacterized protein; Belongs to the GST superfamily. (353 aa)    
Predicted Functional Partners:
Vbra_13635
Uncharacterized protein.
  
  0.776
Vbra_18155
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
  
 
  0.697
Vbra_20958
SprT-like domain-containing protein.
    
 0.679
Vbra_13285
Uncharacterized protein.
    
 0.663
Vbra_6491
Uncharacterized protein.
    
 0.663
Vbra_13255
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.652
Vbra_12373
Nudix hydrolase domain-containing protein.
  
 0.644
Vbra_10653
Nudix hydrolase domain-containing protein.
  
 0.644
Vbra_19783
Uncharacterized protein.
    
 0.629
Vbra_14692
Uncharacterized protein.
   
  0.622
Your Current Organism:
Vitrella brassicaformis
NCBI taxonomy Id: 1169540
Other names: V. brassicaformis CCMP3155, Vitrella brassicaformis CCMP3155
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