Vbra_14625 protein (Vitrella brassicaformis)

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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protein homology

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Score

Vbra_14625

Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family. (156 aa)

Predicted Functional Partners:

Vbra_13635

0.851

Vbra_14692

0.670

Vbra_15567

0.670

Vbra_10400

0.656

Vbra_15445

0.644

Vbra_9666

0.644

Vbra_11599

0.622

Vbra_2842

0.622

Vbra_13134

0.622

Vbra_17492

0.595

Your Current Organism:

Vitrella brassicaformis

NCBI taxonomy Id: 1169540
Other names: V. brassicaformis CCMP3155, Vitrella brassicaformis CCMP3155

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Vbra_10400	Vbra_11599	A0A0G4GUI4	A0A0G4EGC1	Flavodoxin-like domain-containing protein.	FAD-binding FR-type domain-containing protein.	0.694
Vbra_10400	Vbra_13134	A0A0G4GUI4	A0A0G4ET77	Flavodoxin-like domain-containing protein.	FAD-binding FR-type domain-containing protein.	0.694
Vbra_10400	Vbra_13635	A0A0G4GUI4	A0A0G4EV47	Flavodoxin-like domain-containing protein.	Uncharacterized protein.	0.906
Vbra_10400	Vbra_14625	A0A0G4GUI4	A0A0G4F8P9	Flavodoxin-like domain-containing protein.	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	0.656
Vbra_10400	Vbra_14692	A0A0G4GUI4	A0A0G4F7J8	Flavodoxin-like domain-containing protein.	Uncharacterized protein.	0.826
Vbra_10400	Vbra_15567	A0A0G4GUI4	A0A0G4FJ46	Flavodoxin-like domain-containing protein.	Cytochrome b5 heme-binding domain-containing protein.	0.826
Vbra_10400	Vbra_17492	A0A0G4GUI4	A0A0G4GDR9	Flavodoxin-like domain-containing protein.	J domain-containing protein.	0.614
Vbra_10400	Vbra_2842	A0A0G4GUI4	A0A0G4ENY6	Flavodoxin-like domain-containing protein.	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	0.694
Vbra_11599	Vbra_10400	A0A0G4EGC1	A0A0G4GUI4	FAD-binding FR-type domain-containing protein.	Flavodoxin-like domain-containing protein.	0.694
Vbra_11599	Vbra_13635	A0A0G4EGC1	A0A0G4EV47	FAD-binding FR-type domain-containing protein.	Uncharacterized protein.	0.846
Vbra_11599	Vbra_14625	A0A0G4EGC1	A0A0G4F8P9	FAD-binding FR-type domain-containing protein.	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	0.622
Vbra_11599	Vbra_14692	A0A0G4EGC1	A0A0G4F7J8	FAD-binding FR-type domain-containing protein.	Uncharacterized protein.	0.655
Vbra_11599	Vbra_15567	A0A0G4EGC1	A0A0G4FJ46	FAD-binding FR-type domain-containing protein.	Cytochrome b5 heme-binding domain-containing protein.	0.655
Vbra_11599	Vbra_17492	A0A0G4EGC1	A0A0G4GDR9	FAD-binding FR-type domain-containing protein.	J domain-containing protein.	0.507
Vbra_13134	Vbra_10400	A0A0G4ET77	A0A0G4GUI4	FAD-binding FR-type domain-containing protein.	Flavodoxin-like domain-containing protein.	0.694
Vbra_13134	Vbra_13635	A0A0G4ET77	A0A0G4EV47	FAD-binding FR-type domain-containing protein.	Uncharacterized protein.	0.846
Vbra_13134	Vbra_14625	A0A0G4ET77	A0A0G4F8P9	FAD-binding FR-type domain-containing protein.	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	0.622
Vbra_13134	Vbra_14692	A0A0G4ET77	A0A0G4F7J8	FAD-binding FR-type domain-containing protein.	Uncharacterized protein.	0.655
Vbra_13134	Vbra_15567	A0A0G4ET77	A0A0G4FJ46	FAD-binding FR-type domain-containing protein.	Cytochrome b5 heme-binding domain-containing protein.	0.655
Vbra_13134	Vbra_17492	A0A0G4ET77	A0A0G4GDR9	FAD-binding FR-type domain-containing protein.	J domain-containing protein.	0.507

page 1 of 4

Network Stats

number of nodes:

11

number of edges:

55

average node degree:

10

avg. local clustering coefficient:

1

expected number of edges:

18

PPI enrichment p-value:

5.58e-13

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
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Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0071949

FAD binding

5 of 81

1.6

1.69

9.07e-05

GO:0004497

Monooxygenase activity

5 of 149

1.33

1.17

0.00084

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:11285

Phenazine biosynthesis, and ABC transporter substrate binding protein

4 of 5

2.71

3.33

6.30e-07

CL:11222

Mixed, incl. FAD-binding domain, and Gentisate 1,2-dioxygenase-like

5 of 37

1.94

2.61

2.07e-06

CL:2727

Mixed, incl. Steroid metabolic process, and Enoyl-CoA hydratase, C-terminal

3 of 6

2.51

2.1

0.00012

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

rhz00405

Phenazine biosynthesis

4 of 7

2.56

3.63

1.26e-07

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0110142

Ubiquinone biosynthesis complex

5 of 58

1.74

2.2

7.34e-06

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0503

Monooxygenase

3 of 71

1.43

0.67

0.0393

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF01494

FAD binding domain

3 of 25

1.89

1.1

0.0072

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR002938

FAD-binding domain

4 of 51

1.7

1.27

0.0021

IPR036188

FAD/NAD(P)-binding domain superfamily

4 of 117

1.34

0.72

0.0244

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