STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vbra_3063Protein kinase domain-containing protein. (326 aa)    
Predicted Functional Partners:
Vbra_22383
CYCLIN domain-containing protein; Belongs to the cyclin family.
   
 0.807
Vbra_13255
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.788
Vbra_11680
Uncharacterized protein.
   
 0.759
Vbra_18838
Protein kinase domain-containing protein.
   
 0.750
Vbra_18837
Protein kinase domain-containing protein.
   
 0.750
Vbra_9043
TPR_REGION domain-containing protein.
    
 0.721
Vbra_20470
AAA domain-containing protein.
   
 0.692
Vbra_9045
AAA domain-containing protein.
   
 0.692
Vbra_19584
AAA domain-containing protein.
   
 0.692
Vbra_11526
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
   
 0.685
Your Current Organism:
Vitrella brassicaformis
NCBI taxonomy Id: 1169540
Other names: V. brassicaformis CCMP3155, Vitrella brassicaformis CCMP3155
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