STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vbra_22616AAA domain-containing protein. (857 aa)    
Predicted Functional Partners:
Vbra_7632
PHB domain-containing protein.
   
 0.690
Vbra_9954
Prohibitin.
   
 0.690
Vbra_19981
PHB domain-containing protein.
   
 0.687
Vbra_2044
PHB domain-containing protein.
   
 0.687
Vbra_7885
PHB domain-containing protein.
   
 0.687
Vbra_14773
PHB domain-containing protein.
   
 0.687
Vbra_21793
PDZ domain-containing protein.
   
 0.687
Vbra_4809
PHB domain-containing protein.
   
 0.670
Vbra_12927
Prohibitin.
   
 0.670
Vbra_978
PHB domain-containing protein.
   
 0.670
Your Current Organism:
Vitrella brassicaformis
NCBI taxonomy Id: 1169540
Other names: V. brassicaformis CCMP3155, Vitrella brassicaformis CCMP3155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.