STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vbra_9257Uncharacterized protein. (867 aa)    
Predicted Functional Partners:
Vbra_22230
PALP domain-containing protein.
    
 0.739
Vbra_13675
Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.
   
 0.664
Vbra_18213
Mg-por_mtran_C domain-containing protein.
   
 0.664
Vbra_13635
Uncharacterized protein.
   
 0.662
Vbra_5152
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 
 0.622
KYNU
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively; Belongs to the kynureninase family.
  
 
 0.595
Vbra_3592
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.570
Vbra_12559
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.570
Vbra_14455
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.570
Vbra_16151
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.570
Your Current Organism:
Vitrella brassicaformis
NCBI taxonomy Id: 1169540
Other names: V. brassicaformis CCMP3155, Vitrella brassicaformis CCMP3155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.