STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vbra_21695Uncharacterized protein. (191 aa)    
Predicted Functional Partners:
Vbra_23365
GST C-terminal domain-containing protein.
   
 0.816
Vbra_18406
Glutathione synthetase.
   
 0.661
Vbra_482
GSH_synthase domain-containing protein.
   
 0.661
Vbra_22529
Gamma-glutamylcyclotransferase; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.
     
 0.629
Vbra_1567
Uncharacterized protein.
     
 0.622
Vbra_6919
Uncharacterized protein.
   
 
 0.597
Vbra_13701
Uncharacterized protein.
   
 
 0.597
Vbra_6760
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
     
 0.571
Vbra_15655
PKS_ER domain-containing protein.
     
 0.571
Vbra_20032
Uncharacterized protein.
   
 0.565
Your Current Organism:
Vitrella brassicaformis
NCBI taxonomy Id: 1169540
Other names: V. brassicaformis CCMP3155, Vitrella brassicaformis CCMP3155
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