Vbra_16594 protein (Vitrella brassicaformis)

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Vbra_16594

DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (864 aa)

Predicted Functional Partners:

Vbra_1277

0.986

Vbra_11898

0.908

Vbra_17560

0.903

Vbra_23338

0.802

Vbra_11163

0.802

Vbra_12956

0.802

Vbra_20961

0.802

Vbra_4178

0.802

Vbra_5734

0.802

Vbra_15540

0.802

Your Current Organism:

Vitrella brassicaformis

NCBI taxonomy Id: 1169540
Other names: V. brassicaformis CCMP3155, Vitrella brassicaformis CCMP3155

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Vbra_11163	Vbra_11898	A0A0G4EBN3	A0A0G4EHL0	Uncharacterized protein.	ERCC4 domain-containing protein.	0.842
Vbra_11163	Vbra_1277	A0A0G4EBN3	A0A0G4GUW2	Uncharacterized protein.	DUF1767 domain-containing protein.	0.844
Vbra_11163	Vbra_16594	A0A0G4EBN3	A0A0G4FZK5	Uncharacterized protein.	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.	0.802
Vbra_11163	Vbra_17560	A0A0G4EBN3	A0A0G4GE99	Uncharacterized protein.	ERCC4 domain-containing protein.	0.829
Vbra_11898	Vbra_11163	A0A0G4EHL0	A0A0G4EBN3	ERCC4 domain-containing protein.	Uncharacterized protein.	0.842
Vbra_11898	Vbra_1277	A0A0G4EHL0	A0A0G4GUW2	ERCC4 domain-containing protein.	DUF1767 domain-containing protein.	0.968
Vbra_11898	Vbra_12956	A0A0G4EHL0	A0A0G4ESY2	ERCC4 domain-containing protein.	Uncharacterized protein.	0.842
Vbra_11898	Vbra_15540	A0A0G4EHL0	A0A0G4FJZ2	ERCC4 domain-containing protein.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.842
Vbra_11898	Vbra_16594	A0A0G4EHL0	A0A0G4FZK5	ERCC4 domain-containing protein.	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.	0.908
Vbra_11898	Vbra_17560	A0A0G4EHL0	A0A0G4GE99	ERCC4 domain-containing protein.	ERCC4 domain-containing protein.	0.939
Vbra_11898	Vbra_20961	A0A0G4EHL0	A0A0G4EW89	ERCC4 domain-containing protein.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.842
Vbra_11898	Vbra_23338	A0A0G4EHL0	A0A0G4E8T1	ERCC4 domain-containing protein.	Uncharacterized protein.	0.842
Vbra_11898	Vbra_4178	A0A0G4EHL0	A0A0G4F6N3	ERCC4 domain-containing protein.	Uncharacterized protein.	0.842
Vbra_11898	Vbra_5734	A0A0G4EHL0	A0A0G4F6P5	ERCC4 domain-containing protein.	Uncharacterized protein.	0.842
Vbra_1277	Vbra_11163	A0A0G4GUW2	A0A0G4EBN3	DUF1767 domain-containing protein.	Uncharacterized protein.	0.844
Vbra_1277	Vbra_11898	A0A0G4GUW2	A0A0G4EHL0	DUF1767 domain-containing protein.	ERCC4 domain-containing protein.	0.968
Vbra_1277	Vbra_12956	A0A0G4GUW2	A0A0G4ESY2	DUF1767 domain-containing protein.	Uncharacterized protein.	0.844
Vbra_1277	Vbra_15540	A0A0G4GUW2	A0A0G4FJZ2	DUF1767 domain-containing protein.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.844
Vbra_1277	Vbra_16594	A0A0G4GUW2	A0A0G4FZK5	DUF1767 domain-containing protein.	DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.	0.986
Vbra_1277	Vbra_17560	A0A0G4GUW2	A0A0G4GE99	DUF1767 domain-containing protein.	ERCC4 domain-containing protein.	0.962

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