STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vbra_9656MFS domain-containing protein. (612 aa)    
Predicted Functional Partners:
Vbra_13635
Uncharacterized protein.
    
 0.714
Vbra_23365
GST C-terminal domain-containing protein.
    
 0.681
Vbra_1002
Beta-Casp domain-containing protein.
    
 0.610
Vbra_5442
Uncharacterized protein.
    
 0.605
Vbra_14982
Uncharacterized protein.
    
 0.598
Vbra_13885
Uncharacterized protein.
    
 0.573
Vbra_12313
Serine/threonine-protein phosphatase.
    
  0.567
Vbra_6857
Uncharacterized protein.
    
 0.548
Vbra_7436
3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.
    
 0.548
Vbra_3780
Uncharacterized protein.
    
 0.548
Your Current Organism:
Vitrella brassicaformis
NCBI taxonomy Id: 1169540
Other names: V. brassicaformis CCMP3155, Vitrella brassicaformis CCMP3155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.