STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vbra_18529Serine/threonine-protein phosphatase. (333 aa)    
Predicted Functional Partners:
Vbra_20362
Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.
    
 0.946
Vbra_3302
Uncharacterized protein.
    
 0.945
Vbra_19295
Protein phosphatase methylesterase 1; Demethylates proteins that have been reversibly carboxymethylated.
    
 0.924
Vbra_13901
Uncharacterized protein.
    
 0.878
Vbra_10985
Uncharacterized protein.
   
 0.856
Vbra_2904
Uncharacterized protein.
   
 0.856
Vbra_3412
LisH domain-containing protein.
   
 0.856
Vbra_19246
Uncharacterized protein.
   
 0.856
Vbra_1777
EF-hand domain-containing protein.
    
 0.849
Vbra_22139
Uncharacterized protein.
    
 0.849
Your Current Organism:
Vitrella brassicaformis
NCBI taxonomy Id: 1169540
Other names: V. brassicaformis CCMP3155, Vitrella brassicaformis CCMP3155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.