STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vbra_10499Alpha-type protein kinase domain-containing protein. (707 aa)    
Predicted Functional Partners:
Vbra_11458
Aldedh domain-containing protein.
  
 
 0.604
Vbra_15420
Uncharacterized protein.
  
 0.598
Vbra_16262
Uncharacterized protein.
  
 0.598
Vbra_10827
SGL domain-containing protein.
  
 
  0.579
Vbra_19471
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
  
 
 0.578
Vbra_19479
Pyr_redox_2 domain-containing protein.
     
 0.577
Vbra_6813
Tr-type G domain-containing protein.
   
 0.572
Vbra_1411
Tr-type G domain-containing protein.
   
 0.572
Vbra_14669
Uricase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin. Belongs to the uricase family.
    
  0.554
Vbra_17988
Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.552
Your Current Organism:
Vitrella brassicaformis
NCBI taxonomy Id: 1169540
Other names: V. brassicaformis CCMP3155, Vitrella brassicaformis CCMP3155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.