STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vbra_6616WW domain-containing protein. (404 aa)    
Predicted Functional Partners:
Vbra_6492
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.735
Vbra_1344
Uncharacterized protein.
   
 
 0.592
Vbra_21597
Uncharacterized protein.
   
 
 0.578
Vbra_18375
PsaL domain-containing protein.
   
 
 0.577
Vbra_6816
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.555
Vbra_9782
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.555
Vbra_4061
Uncharacterized protein.
    
  0.549
Vbra_18082
FHA domain-containing protein.
   
  0.511
Vbra_12928
Uncharacterized protein.
    
 0.498
Vbra_8531
Uncharacterized protein.
    
 0.498
Your Current Organism:
Vitrella brassicaformis
NCBI taxonomy Id: 1169540
Other names: V. brassicaformis CCMP3155, Vitrella brassicaformis CCMP3155
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