STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF609Zinc finger protein 609 isoform X1. (1410 aa)    
Predicted Functional Partners:
SHPRH
E3 ubiquitin-protein ligase SHPRH isoform X1.
   
  
 0.604
YLPM1
YLP motif-containing protein 1 isoform X1.
   
  
 0.530
PACRGL
PACRG-like protein isoform X1.
      
 0.506
ZFAND6
AN1-type zinc finger protein 6 isoform X2.
      
 0.504
PURB
Transcriptional activator protein Pur-beta.
   
  
 0.481
CTDSP2
Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2.
   
  
 0.469
FOXO3
Forkhead box protein O3.
   
  
 0.464
FOXP4
Forkhead box protein P4 isoform X1.
      
 0.459
FBXW7
F-box/WD repeat-containing protein 7 isoform X1.
      
 0.451
EP400
E1A-binding protein p400 isoform X1.
   
    0.449
Your Current Organism:
Ursus arctos
NCBI taxonomy Id: 116960
Other names: U. arctos horribilis, Ursus arctos horribilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.