STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPL3960S ribosomal protein L39. (51 aa)    
Predicted Functional Partners:
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.996
RPL9
60S ribosomal protein L9.
   
 0.982
RPL24
60S ribosomal protein L24.
  
 0.980
RPL17
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
   
 0.979
RPL5
60S ribosomal protein L5.
   
 0.979
RPL19
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.979
RPL23A
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
   
 0.979
RPL37
Ribosomal protein L37; Binds to the 23S rRNA.
   
 0.979
RPL35
60S ribosomal protein L35.
   
 0.979
RPL4
60S ribosomal protein L4.
  
 0.977
Your Current Organism:
Ursus arctos
NCBI taxonomy Id: 116960
Other names: U. arctos horribilis, Ursus arctos horribilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.