Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATAD5 | LSAMP | A0A3Q7X7Q5 | A0A3Q7ULY4 | ATPase family AAA domain-containing protein 5. | Limbic system-associated membrane protein isoform X1. | 0.544 |
ATAD5 | PPIL6 | A0A3Q7X7Q5 | A0A3Q7XW34 | ATPase family AAA domain-containing protein 5. | Problable inactive peptidyl-prolyl cis-trans isomerase-like 6 isoform X1. | 0.713 |
C1QL3 | CDH9 | A0A3Q7UF69 | A0A3Q7WCB9 | Complement C1q-like protein 3. | Cadherin-9 isoform X1; Cadherins are calcium-dependent cell adhesion proteins. | 0.738 |
C1QL3 | CDHR1 | A0A3Q7UF69 | A0A3Q7WZQ2 | Complement C1q-like protein 3. | Cadherin-related family member 1. | 0.594 |
C1QL3 | LRRTM1 | A0A3Q7UF69 | A0A3Q7VIB5 | Complement C1q-like protein 3. | Leucine-rich repeat transmembrane neuronal protein 1. | 0.559 |
C1QL3 | LSAMP | A0A3Q7UF69 | A0A3Q7ULY4 | Complement C1q-like protein 3. | Limbic system-associated membrane protein isoform X1. | 0.621 |
CDH9 | C1QL3 | A0A3Q7WCB9 | A0A3Q7UF69 | Cadherin-9 isoform X1; Cadherins are calcium-dependent cell adhesion proteins. | Complement C1q-like protein 3. | 0.738 |
CDH9 | LSAMP | A0A3Q7WCB9 | A0A3Q7ULY4 | Cadherin-9 isoform X1; Cadherins are calcium-dependent cell adhesion proteins. | Limbic system-associated membrane protein isoform X1. | 0.611 |
CDHR1 | C1QL3 | A0A3Q7WZQ2 | A0A3Q7UF69 | Cadherin-related family member 1. | Complement C1q-like protein 3. | 0.594 |
CDHR1 | LRRTM1 | A0A3Q7WZQ2 | A0A3Q7VIB5 | Cadherin-related family member 1. | Leucine-rich repeat transmembrane neuronal protein 1. | 0.616 |
CDHR1 | LSAMP | A0A3Q7WZQ2 | A0A3Q7ULY4 | Cadherin-related family member 1. | Limbic system-associated membrane protein isoform X1. | 0.540 |
LRRTM1 | C1QL3 | A0A3Q7VIB5 | A0A3Q7UF69 | Leucine-rich repeat transmembrane neuronal protein 1. | Complement C1q-like protein 3. | 0.559 |
LRRTM1 | CDHR1 | A0A3Q7VIB5 | A0A3Q7WZQ2 | Leucine-rich repeat transmembrane neuronal protein 1. | Cadherin-related family member 1. | 0.616 |
LRRTM1 | LSAMP | A0A3Q7VIB5 | A0A3Q7ULY4 | Leucine-rich repeat transmembrane neuronal protein 1. | Limbic system-associated membrane protein isoform X1. | 0.570 |
LSAMP | ATAD5 | A0A3Q7ULY4 | A0A3Q7X7Q5 | Limbic system-associated membrane protein isoform X1. | ATPase family AAA domain-containing protein 5. | 0.544 |
LSAMP | C1QL3 | A0A3Q7ULY4 | A0A3Q7UF69 | Limbic system-associated membrane protein isoform X1. | Complement C1q-like protein 3. | 0.621 |
LSAMP | CDH9 | A0A3Q7ULY4 | A0A3Q7WCB9 | Limbic system-associated membrane protein isoform X1. | Cadherin-9 isoform X1; Cadherins are calcium-dependent cell adhesion proteins. | 0.611 |
LSAMP | CDHR1 | A0A3Q7ULY4 | A0A3Q7WZQ2 | Limbic system-associated membrane protein isoform X1. | Cadherin-related family member 1. | 0.540 |
LSAMP | LRRTM1 | A0A3Q7ULY4 | A0A3Q7VIB5 | Limbic system-associated membrane protein isoform X1. | Leucine-rich repeat transmembrane neuronal protein 1. | 0.570 |
LSAMP | PPIL6 | A0A3Q7ULY4 | A0A3Q7XW34 | Limbic system-associated membrane protein isoform X1. | Problable inactive peptidyl-prolyl cis-trans isomerase-like 6 isoform X1. | 0.529 |
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