STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABTB1Ankyrin repeat and BTB/POZ domain-containing protein 1 isoform X1. (489 aa)    
Predicted Functional Partners:
OGDHL
2-oxoglutarate dehydrogenase-like, mitochondrial.
    
 
 0.731
CARD19
Caspase recruitment domain-containing protein 19 isoform X2.
      
 0.715
VARS
LOW QUALITY PROTEIN: valine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 
 0.701
SLC9C2
Sodium/hydrogen exchanger 11.
    
 0.609
PCYOX1
Prenylcysteine oxidase 1.
   
  
 0.606
MEGF8
Multiple epidermal growth factor-like domains protein 8.
    
 
 0.601
DPEP1
Dipeptidase; Belongs to the metallo-dependent hydrolases superfamily. Peptidase M19 family.
   
  
 0.600
ASB5
Ankyrin repeat and SOCS box protein 5.
      
 0.596
TMEM91
Transmembrane protein 91 isoform X1.
      
 0.557
KIAA0586
Protein TALPID3 isoform X1.
    
 0.534
Your Current Organism:
Ursus arctos
NCBI taxonomy Id: 116960
Other names: U. arctos horribilis, Ursus arctos horribilis
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