STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM79Transmembrane protein 79. (395 aa)    
Predicted Functional Partners:
IQUB
IQ and ubiquitin-like domain-containing protein.
      
 0.757
TTLL1
Probable tubulin polyglutamylase TTLL1.
      
 0.694
EVPL
Envoplakin isoform X2.
      
 0.689
PRDM8
PR domain zinc finger protein 8.
   
  
 0.598
PPL
Periplakin isoform X3.
      
 0.596
SYT16
Synaptotagmin-16.
    
 
 0.514
SYT14
Synaptotagmin-14 isoform X1.
    
 
 0.514
ACER1
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
      
 0.506
ASCC2
Activating signal cointegrator 1 complex subunit 2 isoform X1.
      
 0.504
SFTPC
Pulmonary surfactant-associated protein C.
    
   0.470
Your Current Organism:
Ursus arctos
NCBI taxonomy Id: 116960
Other names: U. arctos horribilis, Ursus arctos horribilis
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.