STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113245263GON-4-like protein isoform X1. (2313 aa)    
Predicted Functional Partners:
CRAMP1
Protein cramped-like isoform X1.
   
 
 0.665
MAMLD1
Mastermind-like domain-containing protein 1 isoform X1.
    
 0.635
SIN3B
Paired amphipathic helix protein Sin3b.
   
 
 0.568
LSM10
U7 snRNA-associated Sm-like protein LSm10.
    
 0.548
GOLPH3L
Golgi phosphoprotein 3-like isoform X1.
    
 
 0.521
FANCM
Fanconi anemia group M protein.
   
 0.519
POLD1
DNA polymerase.
   
 0.517
TTC24
Tetratricopeptide repeat protein 24.
   
 
 0.516
ASPHD1
Aspartate beta-hydroxylase domain-containing protein 1.
      
 0.516
RAD54L2
Helicase ARIP4.
   
 0.513
Your Current Organism:
Ursus arctos
NCBI taxonomy Id: 116960
Other names: U. arctos horribilis, Ursus arctos horribilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.