STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MATN4Matrilin-4. (624 aa)    
Predicted Functional Partners:
EPYC
Epiphycan.
   
 0.785
COMP
Cartilage oligomeric matrix protein.
   
 0.718
COL9A3
LOW QUALITY PROTEIN: collagen alpha-3(IX) chain.
   
 0.637
LUM
Lumican.
   
 0.625
GAS2
Growth arrest-specific protein 2.
    
 0.619
CNMD
Leukocyte cell-derived chemotaxin 1.
   
 0.594
MMRN2
Multimerin-2 isoform X1.
   
 0.519
THBS4
Thrombospondin-4.
   
 0.515
CHD1L
chromodomain-helicase-DNA-binding protein 1-like isoform X1.
    
 0.500
FAM180B
Protein FAM180B isoform X1.
      
 0.497
Your Current Organism:
Ursus arctos
NCBI taxonomy Id: 116960
Other names: U. arctos horribilis, Ursus arctos horribilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.