STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R3HCC1R3H and coiled-coil domain-containing protein 1 isoform X1. (488 aa)    
Predicted Functional Partners:
SVOPL
Putative transporter SVOPL isoform X1.
      
 0.738
MOCS1
Molybdenum cofactor biosynthesis protein 1 isoform X1.
      
 0.596
PAPLN
Papilin isoform X2.
      
 0.596
PGM2
Phosphoglucomutase-2.
      
 0.593
DMAP1
DNA methyltransferase 1-associated protein 1.
   
  
 0.545
USP4
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
      
 0.527
JMJD1C
Probable JmjC domain-containing histone demethylation protein 2C isoform X1.
      
 0.508
FAM149A
Protein FAM149A isoform X2.
      
 0.507
TMEM247
Transmembrane protein 247.
      
 0.505
AGBL3
Cytosolic carboxypeptidase 3 isoform X1.
      
 0.505
Your Current Organism:
Ursus arctos
NCBI taxonomy Id: 116960
Other names: U. arctos horribilis, Ursus arctos horribilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.