STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113268011Oncomodulin; Belongs to the parvalbumin family. (124 aa)    
Predicted Functional Partners:
CASK
Peripheral plasma membrane protein CASK isoform X7; Belongs to the MAGUK family.
    
 0.653
WDR90
WD repeat-containing protein 90 isoform X1.
   
 0.525
XPC
DNA repair protein complementing XP-C cells.
    
 0.449
TNNI1
Troponin I, slow skeletal muscle.
   
 0.432
LOC113247381
Dynein assembly factor 3, axonemal isoform X1.
   
 0.432
TNNI2
Troponin I, fast skeletal muscle.
   
 0.432
FKBP1A
Peptidylprolyl isomerase.
   
 0.426
FKBP3
Peptidylprolyl isomerase.
   
 0.426
FKBP1B
Peptidylprolyl isomerase.
   
 0.426
ZPLD1
Zona pellucida-like domain-containing protein 1.
  
   
 0.419
Your Current Organism:
Ursus arctos
NCBI taxonomy Id: 116960
Other names: U. arctos horribilis, Ursus arctos horribilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.