STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFV87958.1Amino acid ABC transporter, amino acid-binding/permease protein. (727 aa)    
Predicted Functional Partners:
AFV87959.1
Polar amino acid ABC transporter, ATP-binding subunit.
 0.998
AFV88950.1
ABC-transporter, ATPase component.
 
 0.956
AFV88324.1
Glutamate uptake system ATP-binding protein.
 
 0.954
ehuA
Ectoine/hydroxyectoine ABC transporter, ATP-binding protein.
 
 0.953
AFV89625.1
Glutamate synthase [NADPH], large chain.
  
  
 0.781
AFV89717.1
Phosphotransferase system, EIIB.
  
  
 0.757
AFV88321.1
Glutamine ABC superfamily ATP binding cassette transporter, permease protein.
 
0.638
AFV88322.1
Glutamate ABC transporter permease protein.
 
0.636
AFV89258.1
Amino acid ABC transporter membrane protein.
 
0.622
AFV90897.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 
0.617
Your Current Organism:
Acidipropionibacterium acidipropionici
NCBI taxonomy Id: 1171373
Other names: A. acidipropionici ATCC 4875, Acidipropionibacterium acidipropionici ATCC 4875, Acidipropionibacterium acidipropionici DSM 20272, Acidipropionibacterium acidipropionici JCM 6432, Propionibacterium acidipropionici ATCC 4875, Propionibacterium acidipropionici DSM 20272, Propionibacterium acidipropionici JCM 6432
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