STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFV88209.1Substrate-binding region of ABC-type glycine betaine transport system. (324 aa)    
Predicted Functional Partners:
AFV88601.1
ABC transporter, permease protein.
 
 0.996
proV
Glycine betaine/L-proline transport ATP binding subunit.
 
 0.994
AFV88603.1
ABC transporter, substrate-binding protein, QAT family.
 
  
 
0.903
AFV88602.1
ABC transporter, substrate-binding protein, QAT family.
 
  
 
0.700
betA
Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.
 
   
 0.453
AFV88607.1
Glycine betaine-binding protein.
   
 
 0.404
AFV90816.1
Glycine betaine/choline-binding protein of an ABC-type transport system.
   
 
 0.404
AFV87958.1
Amino acid ABC transporter, amino acid-binding/permease protein.
     
 0.402
Your Current Organism:
Acidipropionibacterium acidipropionici
NCBI taxonomy Id: 1171373
Other names: A. acidipropionici ATCC 4875, Acidipropionibacterium acidipropionici ATCC 4875, Acidipropionibacterium acidipropionici DSM 20272, Acidipropionibacterium acidipropionici JCM 6432, Propionibacterium acidipropionici ATCC 4875, Propionibacterium acidipropionici DSM 20272, Propionibacterium acidipropionici JCM 6432
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.