STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFV88216.1Transcriptional regulator. (254 aa)    
Predicted Functional Partners:
AFV88817.1
Urea amidolyase related protein.
  
    0.965
AFV90766.1
IclR family transcriptional regulator.
  
     0.775
AFV88215.1
KHG/KDPG family aldolase/carbohydrate kinase, PfkB family.
 
   
 0.724
AFV88217.1
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase.
 
   
 0.695
uxaA
Altronate dehydratase.
 
  
 0.619
AFV88218.1
Transcriptional regulator, LacI family.
       0.588
AFV88395.1
Transcriptional regulator, GntR family.
  
  
 0.576
AFV90884.1
GntR family transcriptional regulator.
  
  
 0.536
AFV88361.1
FCD domain-containing protein.
 
  
 0.507
AFV88219.1
Mannitol dehydrogenase domain-containing protein.
 
    0.437
Your Current Organism:
Acidipropionibacterium acidipropionici
NCBI taxonomy Id: 1171373
Other names: A. acidipropionici ATCC 4875, Acidipropionibacterium acidipropionici ATCC 4875, Acidipropionibacterium acidipropionici DSM 20272, Acidipropionibacterium acidipropionici JCM 6432, Propionibacterium acidipropionici ATCC 4875, Propionibacterium acidipropionici DSM 20272, Propionibacterium acidipropionici JCM 6432
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.