Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFV88264.1 | AFV88443.1 | PACID_04220 | PACID_06030 | DNA polymerase III subunit epsilon. | DNA polymerase III, subunit gamma and tau. | 0.955 |
| AFV88264.1 | AFV89060.1 | PACID_04220 | PACID_12380 | DNA polymerase III subunit epsilon. | GIY-YIG catalytic domain-containing protein. | 0.937 |
| AFV88264.1 | AFV89616.1 | PACID_04220 | PACID_18120 | DNA polymerase III subunit epsilon. | DNA polymerase III alpha subunit. | 0.957 |
| AFV88264.1 | AFV90651.1 | PACID_04220 | PACID_28850 | DNA polymerase III subunit epsilon. | DNA polymerase III, delta' subunit. | 0.955 |
| AFV88264.1 | AFV90710.1 | PACID_04220 | PACID_29450 | DNA polymerase III subunit epsilon. | DNA polymerase III subunit epsilon. | 0.912 |
| AFV88264.1 | dnaE2 | PACID_04220 | PACID_23680 | DNA polymerase III subunit epsilon. | Error-prone DNA polymerase; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | 0.596 |
| AFV88264.1 | dnaN | PACID_04220 | PACID_00050 | DNA polymerase III subunit epsilon. | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | 0.972 |
| AFV88264.1 | holA | PACID_04220 | PACID_13810 | DNA polymerase III subunit epsilon. | DNA polymerase III, delta subunit. | 0.944 |
| AFV88264.1 | menC | PACID_04220 | PACID_03070 | DNA polymerase III subunit epsilon. | O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). | 0.620 |
| AFV88264.1 | polA | PACID_04220 | PACID_13010 | DNA polymerase III subunit epsilon. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.587 |
| AFV88443.1 | AFV88264.1 | PACID_06030 | PACID_04220 | DNA polymerase III, subunit gamma and tau. | DNA polymerase III subunit epsilon. | 0.955 |
| AFV88443.1 | AFV89060.1 | PACID_06030 | PACID_12380 | DNA polymerase III, subunit gamma and tau. | GIY-YIG catalytic domain-containing protein. | 0.945 |
| AFV88443.1 | AFV89616.1 | PACID_06030 | PACID_18120 | DNA polymerase III, subunit gamma and tau. | DNA polymerase III alpha subunit. | 0.979 |
| AFV88443.1 | AFV90651.1 | PACID_06030 | PACID_28850 | DNA polymerase III, subunit gamma and tau. | DNA polymerase III, delta' subunit. | 0.925 |
| AFV88443.1 | AFV90710.1 | PACID_06030 | PACID_29450 | DNA polymerase III, subunit gamma and tau. | DNA polymerase III subunit epsilon. | 0.955 |
| AFV88443.1 | dnaE2 | PACID_06030 | PACID_23680 | DNA polymerase III, subunit gamma and tau. | Error-prone DNA polymerase; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | 0.755 |
| AFV88443.1 | dnaN | PACID_06030 | PACID_00050 | DNA polymerase III, subunit gamma and tau. | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | 0.998 |
| AFV88443.1 | holA | PACID_06030 | PACID_13810 | DNA polymerase III, subunit gamma and tau. | DNA polymerase III, delta subunit. | 0.995 |
| AFV88443.1 | polA | PACID_06030 | PACID_13010 | DNA polymerase III, subunit gamma and tau. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.530 |
| AFV89060.1 | AFV88264.1 | PACID_12380 | PACID_04220 | GIY-YIG catalytic domain-containing protein. | DNA polymerase III subunit epsilon. | 0.937 |
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