STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFV88380.1Extracellular solute-binding protein family 1. (452 aa)    
Predicted Functional Partners:
AFV88382.1
Sugar transport system permease.
 
   0.935
AFV88381.1
Putative sugar ABC transporter, permease component.
 
 0.932
AFV88379.1
Beta-galactosidase.
 
    0.731
AFV88691.1
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 
 0.700
AFV90859.1
Binding-protein-dependent transport systems inner membrane component.
  
 
 0.626
AFV90934.1
Binding-protein-dependent transport systems inner membrane component.
  
 
 0.626
AFV88384.1
Transcriptional regulator, LacI family.
 
     0.547
AFV89620.1
Carbohydrate ABC transporter membrane protein.
 
 
 0.497
AFV89902.1
Solute-binding protein of ABC transporter system for sugars.
  
     0.487
AFV89621.1
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.480
Your Current Organism:
Acidipropionibacterium acidipropionici
NCBI taxonomy Id: 1171373
Other names: A. acidipropionici ATCC 4875, Acidipropionibacterium acidipropionici ATCC 4875, Acidipropionibacterium acidipropionici DSM 20272, Acidipropionibacterium acidipropionici JCM 6432, Propionibacterium acidipropionici ATCC 4875, Propionibacterium acidipropionici DSM 20272, Propionibacterium acidipropionici JCM 6432
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.