STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFV88581.1Hypothetical protein. (310 aa)    
Predicted Functional Partners:
AFV89648.1
HNH endonuclease.
  
     0.609
AFV88376.1
Hypothetical protein.
  
     0.578
AFV88283.1
HNH nuclease.
  
     0.537
AFV90908.1
HNH endonuclease.
  
     0.535
AFV87894.1
HNH endonuclease.
  
     0.534
AFV89647.1
HNH endonuclease.
  
     0.512
AFV90445.1
HNH endonuclease.
  
     0.501
AFV91088.1
HNH endonuclease.
  
     0.493
AFV90598.1
HNH endonuclease.
  
     0.481
AFV89625.1
Glutamate synthase [NADPH], large chain.
  
    0.461
Your Current Organism:
Acidipropionibacterium acidipropionici
NCBI taxonomy Id: 1171373
Other names: A. acidipropionici ATCC 4875, Acidipropionibacterium acidipropionici ATCC 4875, Acidipropionibacterium acidipropionici DSM 20272, Acidipropionibacterium acidipropionici JCM 6432, Propionibacterium acidipropionici ATCC 4875, Propionibacterium acidipropionici DSM 20272, Propionibacterium acidipropionici JCM 6432
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