Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFV89165.1 | AFV89166.1 | PACID_13470 | PACID_13480 | Lysine exporter protein (LYSE/YGGA). | Putative AsnC-family transcriptional regulator. | 0.886 |
AFV89165.1 | AFV89625.1 | PACID_13470 | PACID_18210 | Lysine exporter protein (LYSE/YGGA). | Glutamate synthase [NADPH], large chain. | 0.473 |
AFV89165.1 | pheT | PACID_13470 | PACID_10230 | Lysine exporter protein (LYSE/YGGA). | Phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.435 |
AFV89166.1 | AFV89165.1 | PACID_13480 | PACID_13470 | Putative AsnC-family transcriptional regulator. | Lysine exporter protein (LYSE/YGGA). | 0.886 |
AFV89166.1 | AFV89625.1 | PACID_13480 | PACID_18210 | Putative AsnC-family transcriptional regulator. | Glutamate synthase [NADPH], large chain. | 0.498 |
AFV89625.1 | AFV89165.1 | PACID_18210 | PACID_13470 | Glutamate synthase [NADPH], large chain. | Lysine exporter protein (LYSE/YGGA). | 0.473 |
AFV89625.1 | AFV89166.1 | PACID_18210 | PACID_13480 | Glutamate synthase [NADPH], large chain. | Putative AsnC-family transcriptional regulator. | 0.498 |
AFV89625.1 | pheT | PACID_18210 | PACID_10230 | Glutamate synthase [NADPH], large chain. | Phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.876 |
pheT | AFV89165.1 | PACID_10230 | PACID_13470 | Phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | Lysine exporter protein (LYSE/YGGA). | 0.435 |
pheT | AFV89625.1 | PACID_10230 | PACID_18210 | Phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | Glutamate synthase [NADPH], large chain. | 0.876 |