STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFV89195.1ComEA protein. (292 aa)    
Predicted Functional Partners:
AFV89196.1
ComEC/Rec2-like protein.
 
  
 0.963
AFV89054.1
Hypothetical protein.
   
  
 0.742
AFV90090.1
Putative acetyltransferase.
  
    0.715
leuS
Leucine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.606
holA
DNA polymerase III, delta subunit.
       0.558
AFV89819.1
Phosphoribosyl transferase domain-containing protein.
 
  
 0.525
AFV90990.1
23S ribosomal RNA methyltransferase ErmML; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
  
    0.517
AFV89910.1
DNA protecting protein DprA.
 
  
 0.512
AFV89197.1
Type III restriction enzyme, res subunit.
       0.504
AFV88411.1
Cell cycle protein, FtsW/RodA/SpoVE family; Belongs to the SEDS family.
 
  
 0.499
Your Current Organism:
Acidipropionibacterium acidipropionici
NCBI taxonomy Id: 1171373
Other names: A. acidipropionici ATCC 4875, Acidipropionibacterium acidipropionici ATCC 4875, Acidipropionibacterium acidipropionici DSM 20272, Acidipropionibacterium acidipropionici JCM 6432, Propionibacterium acidipropionici ATCC 4875, Propionibacterium acidipropionici DSM 20272, Propionibacterium acidipropionici JCM 6432
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.