Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFV89232.1 | AFV89233.1 | PACID_14150 | PACID_14160 | ATP-dependent DNA helicase, RecQ family. | UDP-N-acetylglucosamine diphosphorylase. | 0.657 |
| AFV89232.1 | AFV89234.1 | PACID_14150 | PACID_14170 | ATP-dependent DNA helicase, RecQ family. | Integral membrane protein; DUF6. | 0.539 |
| AFV89232.1 | tgt | PACID_14150 | PACID_14180 | ATP-dependent DNA helicase, RecQ family. | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...] | 0.401 |
| AFV89233.1 | AFV89232.1 | PACID_14160 | PACID_14150 | UDP-N-acetylglucosamine diphosphorylase. | ATP-dependent DNA helicase, RecQ family. | 0.657 |
| AFV89233.1 | AFV89234.1 | PACID_14160 | PACID_14170 | UDP-N-acetylglucosamine diphosphorylase. | Integral membrane protein; DUF6. | 0.615 |
| AFV89233.1 | tgt | PACID_14160 | PACID_14180 | UDP-N-acetylglucosamine diphosphorylase. | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...] | 0.472 |
| AFV89234.1 | AFV89232.1 | PACID_14170 | PACID_14150 | Integral membrane protein; DUF6. | ATP-dependent DNA helicase, RecQ family. | 0.539 |
| AFV89234.1 | AFV89233.1 | PACID_14170 | PACID_14160 | Integral membrane protein; DUF6. | UDP-N-acetylglucosamine diphosphorylase. | 0.615 |
| AFV89234.1 | AFV89236.1 | PACID_14170 | PACID_14190 | Integral membrane protein; DUF6. | Histidine kinase. | 0.409 |
| AFV89234.1 | AFV89237.1 | PACID_14170 | PACID_14200 | Integral membrane protein; DUF6. | Transcriptional regulator, LuxR family. | 0.402 |
| AFV89234.1 | tgt | PACID_14170 | PACID_14180 | Integral membrane protein; DUF6. | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...] | 0.548 |
| AFV89236.1 | AFV89234.1 | PACID_14190 | PACID_14170 | Histidine kinase. | Integral membrane protein; DUF6. | 0.409 |
| AFV89236.1 | AFV89237.1 | PACID_14190 | PACID_14200 | Histidine kinase. | Transcriptional regulator, LuxR family. | 0.963 |
| AFV89236.1 | tgt | PACID_14190 | PACID_14180 | Histidine kinase. | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...] | 0.548 |
| AFV89237.1 | AFV89234.1 | PACID_14200 | PACID_14170 | Transcriptional regulator, LuxR family. | Integral membrane protein; DUF6. | 0.402 |
| AFV89237.1 | AFV89236.1 | PACID_14200 | PACID_14190 | Transcriptional regulator, LuxR family. | Histidine kinase. | 0.963 |
| AFV89237.1 | tgt | PACID_14200 | PACID_14180 | Transcriptional regulator, LuxR family. | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...] | 0.548 |
| tgt | AFV89232.1 | PACID_14180 | PACID_14150 | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...] | ATP-dependent DNA helicase, RecQ family. | 0.401 |
| tgt | AFV89233.1 | PACID_14180 | PACID_14160 | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...] | UDP-N-acetylglucosamine diphosphorylase. | 0.472 |
| tgt | AFV89234.1 | PACID_14180 | PACID_14170 | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...] | Integral membrane protein; DUF6. | 0.548 |
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