STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFV89261.1GCN5-related protein N-acetyltransferase. (191 aa)    
Predicted Functional Partners:
AFV89262.1
Peptidase S8 and S53, subtilisin, kexin, sedolisin; Belongs to the peptidase S8 family.
   
   0.684
AFV88168.1
Hypothetical protein; DUF1778.
   
   0.537
AFV89260.1
Di-trans,poly-cis-decaprenylcistransferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
    0.488
recO
DNA repair protein recO; Involved in DNA repair and RecF pathway recombination.
       0.468
AFV89264.1
Dehydrogenase.
  
    0.457
AFV88283.1
HNH nuclease.
  
     0.454
AFV91088.1
HNH endonuclease.
  
     0.428
AFV89634.1
HNH nuclease.
  
     0.417
AFV89647.1
HNH endonuclease.
  
     0.414
AFV90598.1
HNH endonuclease.
  
     0.409
Your Current Organism:
Acidipropionibacterium acidipropionici
NCBI taxonomy Id: 1171373
Other names: A. acidipropionici ATCC 4875, Acidipropionibacterium acidipropionici ATCC 4875, Acidipropionibacterium acidipropionici DSM 20272, Acidipropionibacterium acidipropionici JCM 6432, Propionibacterium acidipropionici ATCC 4875, Propionibacterium acidipropionici DSM 20272, Propionibacterium acidipropionici JCM 6432
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.