STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFV89305.1Von Willebrand factor type A domain-containing protein. (324 aa)    
Predicted Functional Partners:
AFV89303.1
Putative MoxR.
 
  
 0.981
AFV89302.1
ATPase family associated with various cellular activities (AAA).
 
  
 0.930
AFV89304.1
Von Willebrand factor type A domain-containing protein.
 
    
0.859
AFV87913.1
Putative lipoprotein.
 
  
 0.820
AFV89306.1
Pyridoxal phosphate enzyme, YggS family; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
       0.776
AFV90827.1
Putative tRNA adenosine deaminase-associated protein.
  
     0.649
cobJ
Precorrin-3B C(17)-methyltransferase.
     
 0.573
AFV89186.1
Hypothetical protein.
   
  0.542
AFV90419.1
Hypothetical protein.
  
     0.532
AFV88297.1
Hypothetical protein.
  
     0.528
Your Current Organism:
Acidipropionibacterium acidipropionici
NCBI taxonomy Id: 1171373
Other names: A. acidipropionici ATCC 4875, Acidipropionibacterium acidipropionici ATCC 4875, Acidipropionibacterium acidipropionici DSM 20272, Acidipropionibacterium acidipropionici JCM 6432, Propionibacterium acidipropionici ATCC 4875, Propionibacterium acidipropionici DSM 20272, Propionibacterium acidipropionici JCM 6432
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