STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFV89349.1Hypothetical protein. (241 aa)    
Predicted Functional Partners:
AFV89352.1
TP901 family phage tail tape measure protein.
       0.898
AFV89350.1
Hypothetical protein.
       0.800
AFV89346.1
Hypothetical protein.
  
    0.796
AFV89345.1
Hypothetical protein.
       0.773
AFV89347.1
Hypothetical protein.
       0.773
AFV89348.1
Hypothetical protein.
       0.773
AFV89351.1
CBM6_mannanase-like domain-containing protein.
       0.773
AFV89353.1
Hypothetical protein.
       0.773
AFV89354.1
Hypothetical protein.
       0.496
AFV89355.1
Hypothetical protein.
       0.475
Your Current Organism:
Acidipropionibacterium acidipropionici
NCBI taxonomy Id: 1171373
Other names: A. acidipropionici ATCC 4875, Acidipropionibacterium acidipropionici ATCC 4875, Acidipropionibacterium acidipropionici DSM 20272, Acidipropionibacterium acidipropionici JCM 6432, Propionibacterium acidipropionici ATCC 4875, Propionibacterium acidipropionici DSM 20272, Propionibacterium acidipropionici JCM 6432
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.