STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFV89726.1Putative adhesion/surface protein. (440 aa)    
Predicted Functional Partners:
AFV90419.1
Hypothetical protein.
  
     0.759
AFV89846.1
CAAX amino terminal protease family protein.
  
     0.754
lysM
LysM domain-containing protein.
  
     0.745
AFV88300.1
Membrane spanning protein.
  
     0.738
AFV87986.1
Putative major facilitator superfamily transporter.
  
     0.722
AFV89193.1
Hypothetical protein.
  
     0.717
AFV89452.1
Cobalamin (Vitamin B12) biosynthesis CbiX protein.
  
     0.700
AFV91124.1
Hypothetical protein.
  
   
 0.696
AFV90827.1
Putative tRNA adenosine deaminase-associated protein.
  
     0.692
cydC
Thiol reductant ABC exporter, CydC subunit.
  
     0.690
Your Current Organism:
Acidipropionibacterium acidipropionici
NCBI taxonomy Id: 1171373
Other names: A. acidipropionici ATCC 4875, Acidipropionibacterium acidipropionici ATCC 4875, Acidipropionibacterium acidipropionici DSM 20272, Acidipropionibacterium acidipropionici JCM 6432, Propionibacterium acidipropionici ATCC 4875, Propionibacterium acidipropionici DSM 20272, Propionibacterium acidipropionici JCM 6432
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