Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFV88363.1 | AFV88365.1 | PACID_05220 | PACID_05240 | Transporter, lactate permease (LctP) family protein; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | Iron-sulfur cluster-binding protein. | 0.961 |
| AFV88363.1 | AFV88366.1 | PACID_05220 | PACID_05250 | Transporter, lactate permease (LctP) family protein; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | Hypothetical protein; COG1556. | 0.915 |
| AFV88363.1 | AFV90104.1 | PACID_05220 | PACID_23220 | Transporter, lactate permease (LctP) family protein; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | FAD linked oxidase, C-terminal domain-containing protein. | 0.674 |
| AFV88363.1 | fni | PACID_05220 | PACID_26720 | Transporter, lactate permease (LctP) family protein; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.857 |
| AFV88363.1 | nifJ | PACID_05220 | PACID_05170 | Transporter, lactate permease (LctP) family protein; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | Pyruvate-flavodoxin oxidoreductase. | 0.783 |
| AFV88365.1 | AFV88363.1 | PACID_05240 | PACID_05220 | Iron-sulfur cluster-binding protein. | Transporter, lactate permease (LctP) family protein; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | 0.961 |
| AFV88365.1 | AFV88366.1 | PACID_05240 | PACID_05250 | Iron-sulfur cluster-binding protein. | Hypothetical protein; COG1556. | 0.999 |
| AFV88365.1 | AFV89625.1 | PACID_05240 | PACID_18210 | Iron-sulfur cluster-binding protein. | Glutamate synthase [NADPH], large chain. | 0.499 |
| AFV88365.1 | AFV90104.1 | PACID_05240 | PACID_23220 | Iron-sulfur cluster-binding protein. | FAD linked oxidase, C-terminal domain-containing protein. | 0.840 |
| AFV88365.1 | nifJ | PACID_05240 | PACID_05170 | Iron-sulfur cluster-binding protein. | Pyruvate-flavodoxin oxidoreductase. | 0.830 |
| AFV88366.1 | AFV88363.1 | PACID_05250 | PACID_05220 | Hypothetical protein; COG1556. | Transporter, lactate permease (LctP) family protein; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | 0.915 |
| AFV88366.1 | AFV88365.1 | PACID_05250 | PACID_05240 | Hypothetical protein; COG1556. | Iron-sulfur cluster-binding protein. | 0.999 |
| AFV88366.1 | AFV90104.1 | PACID_05250 | PACID_23220 | Hypothetical protein; COG1556. | FAD linked oxidase, C-terminal domain-containing protein. | 0.751 |
| AFV89625.1 | AFV88365.1 | PACID_18210 | PACID_05240 | Glutamate synthase [NADPH], large chain. | Iron-sulfur cluster-binding protein. | 0.499 |
| AFV89625.1 | AFV90104.1 | PACID_18210 | PACID_23220 | Glutamate synthase [NADPH], large chain. | FAD linked oxidase, C-terminal domain-containing protein. | 0.876 |
| AFV89625.1 | AFV90508.1 | PACID_18210 | PACID_27410 | Glutamate synthase [NADPH], large chain. | FAD-dependent pyridine nucleotide-disulfide oxidoreductase. | 0.866 |
| AFV89625.1 | nifJ | PACID_18210 | PACID_05170 | Glutamate synthase [NADPH], large chain. | Pyruvate-flavodoxin oxidoreductase. | 0.898 |
| AFV89787.1 | AFV90104.1 | PACID_19890 | PACID_23220 | D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | FAD linked oxidase, C-terminal domain-containing protein. | 0.559 |
| AFV90100.1 | AFV90103.1 | PACID_23180 | PACID_23210 | Acyl-CoA thioester hydrolase, YbgC/YbaW family. | MarR family transcriptional regulator. | 0.487 |
| AFV90100.1 | AFV90104.1 | PACID_23180 | PACID_23220 | Acyl-CoA thioester hydrolase, YbgC/YbaW family. | FAD linked oxidase, C-terminal domain-containing protein. | 0.561 |
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