STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFV90322.1Bacterial extracellular solute-binding protein, family 5. (535 aa)    
Predicted Functional Partners:
AFV90325.1
ABC transporter, permease protein.
 
 
 0.922
AFV90324.1
ABC transporter, permease protein.
 
 
 0.897
AFV90323.1
Oligopeptide/dipeptide ABC superfamily ATP binding cassette transporter; Belongs to the ABC transporter superfamily.
 
  
 0.879
AFV88080.1
ABC transporter.
 
 
 0.808
nifJ
Pyruvate-flavodoxin oxidoreductase.
  
    0.767
oppC
Putative oligopeptide ABC transporter, permease protein OppC.
 
 
 0.765
AFV90695.1
Bacterial extracellular solute-binding protein, family 5.
 
 
 0.616
AFV90696.1
ABC transporter, permease protein.
 
 
 0.533
AFV90698.1
Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily.
 
  
 0.520
AFV90697.1
ABC transporter, permease protein.
 
 
 0.515
Your Current Organism:
Acidipropionibacterium acidipropionici
NCBI taxonomy Id: 1171373
Other names: A. acidipropionici ATCC 4875, Acidipropionibacterium acidipropionici ATCC 4875, Acidipropionibacterium acidipropionici DSM 20272, Acidipropionibacterium acidipropionici JCM 6432, Propionibacterium acidipropionici ATCC 4875, Propionibacterium acidipropionici DSM 20272, Propionibacterium acidipropionici JCM 6432
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