STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFV90506.1Hypothetical protein; DUF3151. (233 aa)    
Predicted Functional Partners:
AFV90093.1
DSBA-like thioredoxin.
  
     0.731
AFV89045.1
Cytochrome c oxidase subunit IV; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
     0.683
AFV89048.1
Cytochrome b/b6 family protein.
  
     0.622
AFV89050.1
Ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit.
  
     0.601
AFV90505.1
Acetyltransferase, GNAT family.
       0.594
AFV89049.1
Tat (Twin-arginine translocation) pathway signal sequence.
  
     0.589
AFV90562.1
ResB-like family protein.
  
     0.573
AFV89026.1
RDD family protein.
  
     0.566
AFV91179.1
Membrane-associated protein.
  
     0.551
AFV89889.1
TIGR03847 multi-domain protein.
  
     0.526
Your Current Organism:
Acidipropionibacterium acidipropionici
NCBI taxonomy Id: 1171373
Other names: A. acidipropionici ATCC 4875, Acidipropionibacterium acidipropionici ATCC 4875, Acidipropionibacterium acidipropionici DSM 20272, Acidipropionibacterium acidipropionici JCM 6432, Propionibacterium acidipropionici ATCC 4875, Propionibacterium acidipropionici DSM 20272, Propionibacterium acidipropionici JCM 6432
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.