Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFV88273.1 | AFV88973.1 | PACID_04310 | PACID_11490 | 1-deoxy-D-xylulose-5-phosphate synthase. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.900 |
| AFV88273.1 | AFV90918.1 | PACID_04310 | PACID_31580 | 1-deoxy-D-xylulose-5-phosphate synthase. | Carbohydrate kinase, FGGY; Belongs to the FGGY kinase family. | 0.544 |
| AFV88273.1 | AFV90919.1 | PACID_04310 | PACID_31590 | 1-deoxy-D-xylulose-5-phosphate synthase. | Carbohydrate kinase, FGGY family protein; Belongs to the FGGY kinase family. | 0.544 |
| AFV88273.1 | AFV90923.1 | PACID_04310 | PACID_31630 | 1-deoxy-D-xylulose-5-phosphate synthase. | Fructose-bisphosphate aldolase. | 0.919 |
| AFV88973.1 | AFV88273.1 | PACID_11490 | PACID_04310 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 1-deoxy-D-xylulose-5-phosphate synthase. | 0.900 |
| AFV88973.1 | AFV90918.1 | PACID_11490 | PACID_31580 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Carbohydrate kinase, FGGY; Belongs to the FGGY kinase family. | 0.544 |
| AFV88973.1 | AFV90919.1 | PACID_11490 | PACID_31590 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Carbohydrate kinase, FGGY family protein; Belongs to the FGGY kinase family. | 0.544 |
| AFV88973.1 | AFV90923.1 | PACID_11490 | PACID_31630 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Fructose-bisphosphate aldolase. | 0.919 |
| AFV90557.1 | AFV90919.1 | PACID_27900 | PACID_31590 | Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | Carbohydrate kinase, FGGY family protein; Belongs to the FGGY kinase family. | 0.559 |
| AFV90918.1 | AFV88273.1 | PACID_31580 | PACID_04310 | Carbohydrate kinase, FGGY; Belongs to the FGGY kinase family. | 1-deoxy-D-xylulose-5-phosphate synthase. | 0.544 |
| AFV90918.1 | AFV88973.1 | PACID_31580 | PACID_11490 | Carbohydrate kinase, FGGY; Belongs to the FGGY kinase family. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.544 |
| AFV90918.1 | AFV90919.1 | PACID_31580 | PACID_31590 | Carbohydrate kinase, FGGY; Belongs to the FGGY kinase family. | Carbohydrate kinase, FGGY family protein; Belongs to the FGGY kinase family. | 0.761 |
| AFV90918.1 | AFV90920.1 | PACID_31580 | PACID_31600 | Carbohydrate kinase, FGGY; Belongs to the FGGY kinase family. | 4-phosphoerythronate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.766 |
| AFV90918.1 | AFV90921.1 | PACID_31580 | PACID_31610 | Carbohydrate kinase, FGGY; Belongs to the FGGY kinase family. | Putative L-ribulose-5-phosphate 4-epimerase. | 0.602 |
| AFV90918.1 | AFV90922.1 | PACID_31580 | PACID_31620 | Carbohydrate kinase, FGGY; Belongs to the FGGY kinase family. | Oxidoreductase. | 0.522 |
| AFV90918.1 | AFV90923.1 | PACID_31580 | PACID_31630 | Carbohydrate kinase, FGGY; Belongs to the FGGY kinase family. | Fructose-bisphosphate aldolase. | 0.487 |
| AFV90918.1 | rhaU | PACID_31580 | PACID_06600 | Carbohydrate kinase, FGGY; Belongs to the FGGY kinase family. | L-rhamnose 1-epimerase. | 0.591 |
| AFV90918.1 | xylA | PACID_31580 | PACID_03490 | Carbohydrate kinase, FGGY; Belongs to the FGGY kinase family. | Xylose isomerase; Belongs to the xylose isomerase family. | 0.970 |
| AFV90919.1 | AFV88273.1 | PACID_31590 | PACID_04310 | Carbohydrate kinase, FGGY family protein; Belongs to the FGGY kinase family. | 1-deoxy-D-xylulose-5-phosphate synthase. | 0.544 |
| AFV90919.1 | AFV88973.1 | PACID_31590 | PACID_11490 | Carbohydrate kinase, FGGY family protein; Belongs to the FGGY kinase family. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.544 |
page 1 of 3