STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR69644.1Predicted arabinose efflux permease, MFS family. (407 aa)    
Predicted Functional Partners:
SDR75082.1
Predicted arabinose efflux permease, MFS family.
  
     0.655
SDS11616.1
Predicted arabinose efflux permease, MFS family.
  
     0.638
SDR69677.1
Hypothetical protein.
       0.615
SDS95662.1
Predicted arabinose efflux permease, MFS family.
  
     0.586
SDT04684.1
Predicted arabinose efflux permease, MFS family.
  
     0.584
SDS63021.1
Predicted arabinose efflux permease, MFS family.
  
     0.566
SDR69637.1
Dihydrofolate reductase.
       0.512
SDR86563.1
Predicted arabinose efflux permease, MFS family.
  
     0.507
SDR97721.1
Predicted arabinose efflux permease, MFS family.
  
     0.433
SDS69110.1
Predicted acetyltransferase.
   
    0.424
Your Current Organism:
Actinopolymorpha singaporensis
NCBI taxonomy Id: 117157
Other names: A. singaporensis, Actinopolymorpha singaporensis Wang et al. 2001 emend. Nouioui et al. 2018, Actinosingapura polymorpha, DSM 22024, JCM 10761, NBRC 100040, NRRL B-24113, strain IM 7744
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