STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR74817.1DNA-binding transcriptional regulator, IclR family. (269 aa)    
Predicted Functional Partners:
SDS49721.1
acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein.
    
  0.689
SDR74836.1
Peptidase family U32.
 
     0.643
SDT16680.1
DNA-binding transcriptional regulator, IclR family.
  
     0.633
SDR74780.1
NADP-dependent aldehyde dehydrogenase.
    
  0.611
SDR74765.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.578
SDR74792.1
2-dehydro-3-deoxy-D-arabinonate dehydratase.
       0.578
SDR88053.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
    
  0.564
SDR74748.1
Phosphoglycerate dehydrogenase.
       0.491
SDS96384.1
DNA-binding transcriptional regulator, FadR family.
  
    0.452
SDR74730.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
    0.419
Your Current Organism:
Actinopolymorpha singaporensis
NCBI taxonomy Id: 117157
Other names: A. singaporensis, Actinopolymorpha singaporensis Wang et al. 2001 emend. Nouioui et al. 2018, Actinosingapura polymorpha, DSM 22024, JCM 10761, NBRC 100040, NRRL B-24113, strain IM 7744
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