STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR75148.1Phytanoyl-CoA dioxygenase (PhyH). (317 aa)    
Predicted Functional Partners:
SDS78730.1
Phytanoyl-CoA dioxygenase (PhyH).
  
     0.771
SDS32157.1
Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family.
  
     0.747
SDR68358.1
Phytanoyl-CoA dioxygenase (PhyH).
  
     0.721
SDS21441.1
Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family.
  
     0.637
SDS71380.1
Phytanoyl-CoA dioxygenase (PhyH).
  
     0.592
SDS95453.1
Phytanoyl-CoA dioxygenase (PhyH).
  
     0.572
SDR75174.1
Sugar lactone lactonase YvrE.
       0.516
SDR75139.1
MFS transporter, MHS family, proline/betaine transporter.
       0.508
SDS21717.1
Phytanoyl-CoA dioxygenase (PhyH).
  
     0.504
SDS90028.1
Putative esterase.
  
     0.461
Your Current Organism:
Actinopolymorpha singaporensis
NCBI taxonomy Id: 117157
Other names: A. singaporensis, Actinopolymorpha singaporensis Wang et al. 2001 emend. Nouioui et al. 2018, Actinosingapura polymorpha, DSM 22024, JCM 10761, NBRC 100040, NRRL B-24113, strain IM 7744
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