STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR75783.1Carbonic anhydrase. (165 aa)    
Predicted Functional Partners:
SDS47806.1
Carbonic anhydrase or acetyltransferase, isoleucine patch superfamily.
    
 0.973
SDR83637.1
Ribulose-bisphosphate carboxylase small chain.
    
 0.951
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.794
SDS91396.1
Single-strand DNA-binding protein.
  
     0.524
SDR75735.1
Hypothetical protein.
       0.431
SDR75762.1
Hypothetical protein.
       0.431
SDS79204.1
Signal transduction histidine kinase.
     
 0.429
SDR80210.1
Formate dehydrogenase major subunit; Manually curated; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
    0.427
SDR83602.1
Ribulose-bisphosphate carboxylase large chain; Belongs to the RuBisCO large chain family.
    
 
 0.424
SDT02933.1
TIGR03085 family protein.
  
    0.413
Your Current Organism:
Actinopolymorpha singaporensis
NCBI taxonomy Id: 117157
Other names: A. singaporensis, Actinopolymorpha singaporensis Wang et al. 2001 emend. Nouioui et al. 2018, Actinosingapura polymorpha, DSM 22024, JCM 10761, NBRC 100040, NRRL B-24113, strain IM 7744
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