STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR85614.1Uncharacterized conserved protein. (138 aa)    
Predicted Functional Partners:
SDR85590.1
RNA polymerase sigma factor, sigma-70 family.
 
     0.943
SDR81183.1
Uncharacterized conserved protein.
  
     0.758
SDS11368.1
RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.747
SDS14807.1
Uncharacterized conserved protein.
  
     0.746
SDS89759.1
RNA polymerase sigma factor, sigma-70 family.
  
     0.746
SDS56762.1
RNA polymerase sigma factor, sigma-70 family.
  
     0.741
SDS89852.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.731
SDR81161.1
RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family.
  
     0.726
SDT25502.1
Uncharacterized conserved protein.
  
     0.724
SDS82589.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.722
Your Current Organism:
Actinopolymorpha singaporensis
NCBI taxonomy Id: 117157
Other names: A. singaporensis, Actinopolymorpha singaporensis Wang et al. 2001 emend. Nouioui et al. 2018, Actinosingapura polymorpha, DSM 22024, JCM 10761, NBRC 100040, NRRL B-24113, strain IM 7744
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.