STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR87425.1Sugar phosphate isomerase/epimerase. (273 aa)    
Predicted Functional Partners:
SDS69203.1
Predicted dehydrogenase.
  
 
  0.770
SDT13157.1
Oxidoreductase family, NAD-binding Rossmann fold.
  
 
  0.757
SDR91362.1
Hypothetical protein.
  
     0.738
SDS29877.1
Oxidoreductase family, NAD-binding Rossmann fold; Manually curated.
  
 
  0.722
SDS92570.1
Hypothetical protein.
  
     0.715
SDS38476.1
Dienelactone hydrolase.
  
     0.688
SDS39401.1
Abhydrolase family protein.
  
     0.672
SDS79394.1
Predicted dehydrogenase.
  
 
  0.664
SDS67622.1
Abhydrolase family protein.
  
     0.647
SDR88913.1
Alpha/beta hydrolase family protein.
  
     0.641
Your Current Organism:
Actinopolymorpha singaporensis
NCBI taxonomy Id: 117157
Other names: A. singaporensis, Actinopolymorpha singaporensis Wang et al. 2001 emend. Nouioui et al. 2018, Actinosingapura polymorpha, DSM 22024, JCM 10761, NBRC 100040, NRRL B-24113, strain IM 7744
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.