STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR93586.1Uncharacterized membrane protein. (484 aa)    
Predicted Functional Partners:
SDR93634.1
Hypothetical protein.
 
     0.696
SDT17516.1
Hypothetical protein.
  
     0.675
SDR93625.1
Membrane carboxypeptidase (penicillin-binding protein).
 
    0.668
SDR94534.1
Predicted nucleic acid-binding protein, contains Zn-ribbon domain (includes truncated derivatives).
  
     0.627
SDT02933.1
TIGR03085 family protein.
  
     0.596
SDS51930.1
Phospho-glucose isomerase C-terminal SIS domain-containing protein.
  
     0.555
SDS92905.1
Protein of unknown function.
  
     0.553
SDT14379.1
Hypothetical protein.
  
     0.540
SDS17383.1
Helicase/secretion neighborhood CpaE-like protein.
  
     0.537
SDT06581.1
Lipoprotein-anchoring transpeptidase ErfK/SrfK.
  
     0.507
Your Current Organism:
Actinopolymorpha singaporensis
NCBI taxonomy Id: 117157
Other names: A. singaporensis, Actinopolymorpha singaporensis Wang et al. 2001 emend. Nouioui et al. 2018, Actinosingapura polymorpha, DSM 22024, JCM 10761, NBRC 100040, NRRL B-24113, strain IM 7744
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.