STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR96066.1ABC-2 type transport system permease protein. (247 aa)    
Predicted Functional Partners:
SDR96030.1
ABC-2 type transport system ATP-binding protein.
 
 
  0.939
SDR96100.1
Signal transduction histidine kinase.
 
    0.754
SDR96120.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
     0.615
SDS14285.1
ABC-2 type transport system ATP-binding protein.
  
 
  0.535
SDT09914.1
ABC-2 type transport system ATP-binding protein.
  
 
  0.508
SDS74166.1
Thiazole/oxazole-forming peptide maturase, SagD family component.
  
  
 0.471
SDS59906.1
Hypothetical protein.
  
    0.438
SDR96001.1
GntR family transcriptional regulator / MocR family aminotransferase.
       0.410
SDR69572.1
Predicted kinase, aminoglycoside phosphotransferase (APT) family.
  
     0.403
Your Current Organism:
Actinopolymorpha singaporensis
NCBI taxonomy Id: 117157
Other names: A. singaporensis, Actinopolymorpha singaporensis Wang et al. 2001 emend. Nouioui et al. 2018, Actinosingapura polymorpha, DSM 22024, JCM 10761, NBRC 100040, NRRL B-24113, strain IM 7744
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.