Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDR68268.1 | SDS00815.1 | SAMN04489717_0032 | SAMN04489717_1312 | Hypothetical protein; Belongs to the glycosyl hydrolase 26 family. | Hypothetical membrane protein. | 0.500 |
SDR92474.1 | SDS00815.1 | SAMN04489717_1047 | SAMN04489717_1312 | Anthranilate synthase, component I. | Hypothetical membrane protein. | 0.686 |
SDR92474.1 | SDT15533.1 | SAMN04489717_1047 | SAMN04489717_5253 | Anthranilate synthase, component I. | Aminodeoxychorismate synthase, component I. | 0.999 |
SDS00788.1 | SDS00815.1 | SAMN04489717_1311 | SAMN04489717_1312 | Uncharacterized conserved protein YndB, AHSA1/START domain. | Hypothetical membrane protein. | 0.536 |
SDS00815.1 | SDR68268.1 | SAMN04489717_1312 | SAMN04489717_0032 | Hypothetical membrane protein. | Hypothetical protein; Belongs to the glycosyl hydrolase 26 family. | 0.500 |
SDS00815.1 | SDR92474.1 | SAMN04489717_1312 | SAMN04489717_1047 | Hypothetical membrane protein. | Anthranilate synthase, component I. | 0.686 |
SDS00815.1 | SDS00788.1 | SAMN04489717_1312 | SAMN04489717_1311 | Hypothetical membrane protein. | Uncharacterized conserved protein YndB, AHSA1/START domain. | 0.536 |
SDS00815.1 | SDS20277.1 | SAMN04489717_1312 | SAMN04489717_1941 | Hypothetical membrane protein. | Ribosomal protection tetracycline resistance protein. | 0.698 |
SDS00815.1 | SDS83604.1 | SAMN04489717_1312 | SAMN04489717_4049 | Hypothetical membrane protein. | Translation elongation factor 2 (EF-2/EF-G). | 0.657 |
SDS00815.1 | SDS89383.1 | SAMN04489717_1312 | SAMN04489717_4250 | Hypothetical membrane protein. | Ribosomal protection tetracycline resistance protein. | 0.657 |
SDS00815.1 | SDS94234.1 | SAMN04489717_1312 | SAMN04489717_4432 | Hypothetical membrane protein. | Hypothetical protein. | 0.533 |
SDS00815.1 | SDT15533.1 | SAMN04489717_1312 | SAMN04489717_5253 | Hypothetical membrane protein. | Aminodeoxychorismate synthase, component I. | 0.686 |
SDS00815.1 | fusA | SAMN04489717_1312 | SAMN04489717_2732 | Hypothetical membrane protein. | Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...] | 0.657 |
SDS00815.1 | rph | SAMN04489717_1312 | SAMN04489717_3091 | Hypothetical membrane protein. | RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.610 |
SDS20277.1 | SDS00815.1 | SAMN04489717_1941 | SAMN04489717_1312 | Ribosomal protection tetracycline resistance protein. | Hypothetical membrane protein. | 0.698 |
SDS83604.1 | SDS00815.1 | SAMN04489717_4049 | SAMN04489717_1312 | Translation elongation factor 2 (EF-2/EF-G). | Hypothetical membrane protein. | 0.657 |
SDS89383.1 | SDS00815.1 | SAMN04489717_4250 | SAMN04489717_1312 | Ribosomal protection tetracycline resistance protein. | Hypothetical membrane protein. | 0.657 |
SDS94234.1 | SDS00815.1 | SAMN04489717_4432 | SAMN04489717_1312 | Hypothetical protein. | Hypothetical membrane protein. | 0.533 |
SDT15533.1 | SDR92474.1 | SAMN04489717_5253 | SAMN04489717_1047 | Aminodeoxychorismate synthase, component I. | Anthranilate synthase, component I. | 0.999 |
SDT15533.1 | SDS00815.1 | SAMN04489717_5253 | SAMN04489717_1312 | Aminodeoxychorismate synthase, component I. | Hypothetical membrane protein. | 0.686 |
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