STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS01523.1Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family. (293 aa)    
Predicted Functional Partners:
SDR96393.1
Selenocysteine lyase/Cysteine desulfurase.
    
   0.682
SDS90882.1
Selenocysteine lyase/Cysteine desulfurase.
    
   0.682
SDT09746.1
Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
    
   0.682
SDT13472.1
Cysteine desulfurase family protein, VC1184 subfamily.
    
   0.682
SDT14974.1
isopenicillin-N epimerase.
    
   0.682
SDT02902.1
Alpha-1,2-mannosidase, putative.
  
     0.596
SDS38650.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
  
     0.544
SDS01487.1
Hypothetical protein.
       0.499
SDS41729.1
Alpha-1,2-mannosidase, putative.
  
     0.401
Your Current Organism:
Actinopolymorpha singaporensis
NCBI taxonomy Id: 117157
Other names: A. singaporensis, Actinopolymorpha singaporensis Wang et al. 2001 emend. Nouioui et al. 2018, Actinosingapura polymorpha, DSM 22024, JCM 10761, NBRC 100040, NRRL B-24113, strain IM 7744
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