STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS03306.1Hypothetical protein. (276 aa)    
Predicted Functional Partners:
SDR69251.1
Helix-turn-helix domain-containing protein.
  
     0.743
SDT03107.1
Helix-turn-helix domain-containing protein; Manually curated.
  
     0.725
SDT16942.1
Protein of unknown function.
  
     0.717
SDR69242.1
Protein of unknown function.
  
     0.707
SDT06271.1
Predicted RNA-binding protein containing a PIN domain.
  
     0.690
SDS70479.1
Helix-turn-helix domain-containing protein.
  
     0.649
SDS08283.1
Helix-turn-helix domain-containing protein.
  
     0.638
SDR90792.1
Hypothetical protein.
  
     0.627
SDS03242.1
Valine dehydrogenase (NAD+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
       0.626
SDR74225.1
Helix-turn-helix domain-containing protein.
  
     0.612
Your Current Organism:
Actinopolymorpha singaporensis
NCBI taxonomy Id: 117157
Other names: A. singaporensis, Actinopolymorpha singaporensis Wang et al. 2001 emend. Nouioui et al. 2018, Actinosingapura polymorpha, DSM 22024, JCM 10761, NBRC 100040, NRRL B-24113, strain IM 7744
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.